Journal Paper

1. "Computational design and investigation of the monomeric spike SARS-CoV-2-ferritin nanocage vaccine stability and interactions"
   Farnaz Garmehmotlagh, Maryam Azimzadeh Irani, Seyedeh Zeinab Masoomi Nomandan, Mohammad Assadizadeh
   Frontiers in Molecular Biosciences, Vol. 11, 2024
2. "Molecular mechanism of glycosylated IL-1RII counteraction with IL-1RI in regulation of the immune response"
   Narges Jamshidi Khameneh, Maryam Azimzadeh Irani, Mohammad Reza Ejtehadi
   MOLECULAR SIMULATION, Vol. 49, pp.1491-1501, 2023
3. "In-silico structural analysis of Heterocephalus glaber amyloid beta: an anti-Alzheimer's peptide"
   Ali Javanmard, Maryam Azimzadeh Irani, Ghazal Tafazzoli, Ayla Esmaeilzadeh, Mohammad Shirinpoor, SeyyedMohammadHasan Haghayeghi
   Molecular Biology Research Communications, Vol. 13, pp.29-42, 2023
4. "Oligomer formation of SARS-CoV-2 ORF8 through 73YIDI76 motifs regulates immune response and non-infusion antiviral interactions"
   Mohammad Assadizadeh, Maryam Azimzadeh Irani
   Frontiers in Molecular Biosciences, Vol. 10, 2023
5. "Molecular arrangement of cellulose bio-nanofibers in formation of higherorder assemblies"
   Maryam Azimzadeh Irani, Hossein Askari, Mehdi Jahanfar, , Akram Hamedi
   JOURNAL OF POLYMER RESEARCH, Vol. 30, 2023
6. "Structural arrangement of the active back-to-back dimer in N-glycosylated ErbB receptors is regulated by heterodimerization"
   Romina Mashayekhpoul, Maryam Azimzadeh Irani, Seyedeh Zeinab Masoomi Nomandan
   Molecular Biology Research Communications, Vol. 12, pp.95-107, 2023
7. "Structural investigation of Amphibalanus amphitrite cement proteins: an in-silico study"
   Mohammad Assadizadeh, Nima Goodarz, Amirhossein Mahdavi pak, SeyyedMohammadHasan Haghayeghi, Maryam Azimzadeh Irani
   Bioinspired Biomimetic and Nanobiomaterials, Vol. 12, pp.140-152, 2023
8. "Functional annotation and evaluation of hypothetical proteins in cyanobacterium Synechocystis sp. PCC 6803"
   Mehrdad Shahbazi, Masoud Tohidfar, Maryam Azimzadeh Irani, Rahele ghanbari
   Biocatalysis and Agricultural Biotechnology, Vol. 39, 2022
9. "Metabolomics analysis of milk thistle lipids to identify drought-tolerant genes"
   Rahele Ghanbari Moheb Seraj, Masoud Tohidfar, Maryam Azimzadeh Irani, Keyvan Esmaeilzadeh?Salestani, Toktam Moradian, Asadollah Ahmadikhah, Mahdi Behnamian
   Scientific Reports, Vol. 12, 2022
10. "Cancer regulator EGFR-ErbB4 heterodimer is stabilized through glycans at the dimeric interface"
    Zahra Motamedi, Mehri Shahsavari, Hassan Rajabi Maham, Maryam Azimzadeh Irani
    JOURNAL OF MOLECULAR MODELING, Vol. 28, 2022
11. "In silico design of refined ferritin-SARS-CoV-2 glyco-RBD nanoparticle vaccine"
    Seyedeh Zeinab Masoomi Nomandan, Maryam Azimzadeh Irani, Seyed Masoud Hosseini
    Frontiers in Molecular Biosciences, Vol. 9, pp.1-19, 2022
12. "S494 O-glycosylation site on the SARS-CoV-2 RBD affects the virus affinity to ACE2 and its infectivity; a molecular dynamics study"
    Shadi Rahnama, Maryam Azimzadeh Irani, Mehriar Amininasab, Mohammad Reza Ejtehadi
    Scientific Reports, Vol. 11, 2021
13. "Identification of the key functional genes in salt-stress tolerance of Cyanobacterium Phormidium tenue using in silico analysis"
    Mehrdad Shahbazi, Masoud Tohidfar, Maryam Azimzadeh Irani
    3 Biotech, Vol. 11, 2021
14. "Glycosylation promotes the cancer regulator EGFR-ErbB2 heterodimer formation - molecular dynamics study"
    Zahra Motamedi, Hassan Rajabi Maham, Maryam Azimzadeh Irani
    JOURNAL OF MOLECULAR MODELING, Vol. 17, 2021
15. "Glycan-mediated functional assembly of IL-1RI: structural insights into completion of the current description for immune response"
    Maryam Azimzadeh Irani, Mohammad Reza Ejtehadi
    JOURNAL OF BIOMOLECULAR STRUCTURE and DYNAMICS, Vol. ., pp.1-11, 2020
16. "GAG positioning on IL-1RI; A mechanism regulated by dual effect of glycosylation"
    Maryam Azimzadeh Irani, Mohammad Reza Ejtehadi
    GLYCOBIOLOGY, Vol. 29, pp.803-812, 2019
17. "Correlation between experimentally indicated and atomistically simulated roles of EGFR Nglycosylation"
    Maryam Azimzadeh Irani
    MOLECULAR SIMULATION, Vol. 44, pp.743-748, 2018
18. "Role of N-glycosylation in EGFR ectodomain ligand binding"
    Maryam Azimzadeh Irani, Srinivasaraghavan Kannan, Chandra Verma
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, Vol. 85, pp.1529-1549, 2017
19. "A Review on Molecular Dynamics Simulations in Understanding the Mechanism of Biological Phenomena at the nanoscale"
    Maryam Azimzadeh Irani
    Vol. 18, pp.8-13, 2022
20. ""
    Maryam Azimzadeh Irani, Hossein Askari
    Vol. 17, pp.1-5, 2022

Conference Paper

1. "Analyzing Monomeric and Dimeric ORF8 Interactions with Antiviral Small Molecules"
   Elham Abdollahi, Maryam Azimzadeh Irani
   , 2024
2. "In silico design of ferritin-EBV gp350 nanoparticle vaccine"
   Maryam Salehi, Maryam Azimzadeh Irani, Seyed Masoud Hosseini
   24th IRAN'S INTERNATIONAL CONGRESS OF MICROBIOLOGY, 2023
3. "ORF 8 : Promising Target Protein for COVID 19 Treatment"
   MOSTAFA BAGHERI FAR, Mohammad Yaghoubi, Seyed Masoud Hosseini, Maryam Azimzadeh Irani
   , 2021
4. "Molecular Modeling of Wuhan SARS-CoV-2 RBD in Complex with Ferritin Nanoparticle"
   Seyedeh Zeinab Masoomi Nomandan, Seyed Masoud Hosseini, Maryam Azimzadeh Irani
   , 2021
5. "Structural Analysis of the Globins Binding Sites"
   Seyedeh shideh Ghoreishi, Maryam Azimzadeh Irani, Hossein Askari
   The 1st International Conference on Biotechnology and Global Development, 2021
6. "O-glycosylation of the SARS-CoV-2 RBD Affects the Virus Affinity to ACE2"
   Shadi Rahnama, Maryam Azimzadeh Irani, Mehriar Amininasab, Mohammad Reza Ejtehadi
   International virtual conference on Biophysics of life on Earth and the Covid-19 pandemic (World Biophysics Week 2021), 2021
7. "Does cellular glycation in diabetic patients interfere with the N-glycosylation of the transmembrane proteins?"
   Maryam Azimzadeh Irani
   2 International Conference on Application of Advanced Technologies Biological Sciences, 2021
8. "Sweet Story of Immune Response"
   Maryam Azimzadeh Irani, Narges Jamshidi, Mohammad Reza Ejtehadi
   Joint QLS-CMSP Virtual Summer Retreat on Heat, Water, Noise, and Life, 2020
9. "Unravelling the structural role of glycoconjugates in triggering the inflammatory responses"
   Maryam Azimzadeh Irani, Mohammad Reza Ejtehadi
   The 5th International Conference on Molecular Simulation (ICMS 2019), 2019
10. "Role of Glycosylation in Developing Anti-cancer Therapeutics"
    Maryam Azimzadeh Irani
    , 2018
11. "N-glycosylation modulates the tethered-extended equilibrium of the extracellular domain of EGFR"
    Maryam Azimzadeh Irani, Chandra Verma
    2016 Annual Meeting of the Society for Glycobiology, 2016
12. "Role of N-glycosylation on EGFR Ectodomain Ligand Binding"
    Maryam Azimzadeh Irani, Chandra Verma
    15th International Conference On BioInformatics (InCOB 2016), 2016
13. "Glycosylation of EGFR Extracellular Domain Induces Receptor Stability"
    Maryam Azimzadeh Irani, Chandra Verma
    the 29th Annual Symposium of The Protein Society, 2015
14. "In silico Analysis of Molecular Interactions of Vitamin D3 with Cellulose Nanofiber Assemblies"
    Mohammad Saeed Heidar, Mehdi Jahanfar, Naser Farrokhi, Maryam Azimzadeh Irani
    , 2023
15. "Selection of Barnacle Species for Producing Bio-adhesives with the Least Inflammatory Interaction with Human Body"
    Reyhaneh Karbassian, Maryam Azimzadeh Irani
    13th National and 5th International Biotechnology Congress of the Iranian Biotechnology Society., 2023
16. ""
    SeyyedMohammadHasan Haghayeghi, Maryam Azimzadeh Irani, Hossein Askari
    , 2023
17. ""
    Mohammad Assadizadeh, Maryam Azimzadeh Irani
    The 6th National Conference on Modern Research in Medicinal plants, chemistry and biology of Iran, 2023
18. "Towards enhancing L-Asparaginase stability by computational-structural modeling"
    Leila Sarafan Soleiman Zadeh, Mohammad Yaghoubi, Gholamhossein Ebrahimipour, Maryam Azimzadeh Irani
    2nd International and 11th National Iranian Conference On Bioinformatics, 2023
19. "Phylogenetic study of L-asparaginase II (AsnB) in the bacteria domain and fungi kingdom"
    Mahdis Mofidi, Maryam Azimzadeh Irani, Gholamhossein Ebrahimipour, Mohammad Yaghoubi
    2nd International and 11th National Iranian Conference On Bioinformatics, 2023
20. "The Molecular Modeling of Vitamin E Arrangement on Fibrous Cellulose Superstructures"
    Nima Goodarz, Ali Javanmard, Mehdi Jahanfar, Maryam Azimzadeh Irani
    2nd International and 11th National Iranian Conference On Bioinformatics, 2023
21. "In-silico emplacement of curcumin on higher-order assemblies of cellulose nanofibers"
    Akram Hamedi, Mehdi Jahanfar, Naser Farrokhi, Maryam Azimzadeh Irani
    2nd International and 11th National Iranian Conference On Bioinformatics, 2023
22. "Artificial Intelligence Folding of Crimean-Congo Hemorrhagic Fever Virus Proteins for Establishing Vaccine Strategies"
    Romina Rezaee, Seyedeh Mobina Hosseini Neiresi, Negin Niaraki Asli, Parastoo Akbarnia, SeyyedMohammadHasan Haghayeghi, Maryam Azimzadeh Irani
    The 2nd International and 4th National Conference on Biomathematics, 2023
23. "In-silico investigation of the ErbB family dimerization mechanism"
    Romina Mashayekhpoul, Maryam Azimzadeh Irani, Seyedeh Zeinab Masoomi Nomandan
    The 2nd International and 4th National Conference on Biomathematics, 2023
24. "Investigating the interaction of mannose receptor with ferritin-RBD nanoparticle vaccine of SARS-CoV 2 virus"
    Mohammad Ranjbar Taklimi, Maryam Azimzadeh Irani
    , 2023
25. "Molecular Modeling of Nannochloropsis gaditana Cellulose Synthase"
    SeyyedMohammadHasan Haghayeghi, Hossein Askari, Maryam Azimzadeh Irani
    17th National and 2nd International Conference of Iranian Biophysical Chemistry 6-7 Sep, 2022 University of Guilan, 2022
26. "Structural Arrangement Of SARS-CoV-2 ORF8 Oligomers"
    Mohammad Assadizadeh, Maryam Azimzadeh Irani
    8th Iranian Congress of Virology, 2022
27. "Function of lectins in the efficiency of ferritin nanoparticle vaccines"
    Seyedeh Zeinab Masoomi Nomandan, Seyed Masoud Hosseini, Maryam Azimzadeh Irani
    The 10th National Bioinformatics and first international conference of Iran, 2022
28. "Molecular Mechanism of Cellulose Nanofibers Arrangement"
    Maryam Azimzadeh Irani, Hossein Askari
    The 1st International and 3rd National Conference on Biomathematics, 2022
29. "Glycosylation Contribution to the Stability of IL-1RII Structure"
    Narges Jamshidi, Maryam Azimzadeh Irani, Mohammad Reza Ejtehadi
    , 2021
30. "Elucidating the Roles of lL-1Rll in the Regulation of Human Immune System"
    Narges Jamshidi, Maryam Azimzadeh Irani, Mohammad Reza Ejtehadi
    ninth iranian conference on on bioinformatics, 2020
31. "Binding Mechanism of Glycosaminoglycans to Glycosylated Interleukin 1 Receptor Type I"
    Maryam Azimzadeh Irani, Mohammad Reza Ejtehadi
    , pp.50-50, 2019